STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYIC_ENCCUProbable isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (1017 aa)    
Predicted Functional Partners:
SYP_ENCCU
Proline--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.986
SYLC_ENCCU
Probable leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.985
SYR_ENCCU
Arginine--tRNA ligase.
  
 0.974
SYEC_ENCCU
Probable glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 2 subfamily.
  
 0.973
SYMC_ENCCU
Probable methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.967
SYFB_ENCCU
Probable phenylalanine--tRNA ligase beta subunit.
  
 
 0.964
SYVC_ENCCU
Probable valine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
0.962
SYKC_ENCCU
Probable lysine--tRNA ligase, cytoplasmic.
  
 0.960
SYQ_ENCCU
Probable glutamine--tRNA ligase.
  
 0.951
Q8SVQ7_ENCCU
tRNA-binding domain-containing protein.
  
 0.946
Your Current Organism:
Encephalitozoon cuniculi
NCBI taxonomy Id: 284813
Other names: E. cuniculi GB-M1, Encephalitozoon cuniculi GB-M1
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