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Phatr16125 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr16125" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr16125Predicted protein (50 aa)    
Predicted Functional Partners:
Phatr27125
Predicted protein (115 aa)
   
  0.999
Phatr30262
Ribosomal protein L19 (192 aa)
     
  0.995
Phatr21659
Predicted protein (136 aa)
     
  0.995
Phatr19615
Predicted protein (121 aa)
     
  0.994
Phatr19025
Predicted protein (205 aa)
     
  0.993
Phatr11032
Predicted protein (115 aa)
     
  0.993
rpl14
Predicted protein (143 aa)
     
  0.993
Phatr29177
Predicted protein (185 aa)
     
  0.992
Phatr47804
Predicted protein (94 aa)
     
  0.991
Phatr46735
Predicted protein (163 aa)
   
  0.990
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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