STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ91406.1Hypoxanthine phosphoribosyltransferase. (181 aa)    
Predicted Functional Partners:
SFL09937.1
Adenylate kinase.
 
 
 0.963
SFK77260.1
Adenine deaminase.
 
  
 0.948
SFK00976.1
Purine-nucleoside phosphorylase.
     
 0.941
SFK63798.1
Guanylate kinase.
  
  
 0.936
SFK64278.1
GMP synthase (glutamine-hydrolysing).
  
 
 0.935
SFK64475.1
IMP dehydrogenase.
    
 0.931
SFK35877.1
Purine-nucleoside phosphorylase.
  
 0.921
SFK57451.1
Adenylosuccinate synthetase.
  
 
 0.916
SFK57315.1
Membrane protease FtsH catalytic subunit.
  
  
 0.908
SFJ90929.1
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
    
 0.907
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.