STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ99984.1Glutamate-5-semialdehyde dehydrogenase. (431 aa)    
Predicted Functional Partners:
SFK00002.1
Glutamate 5-kinase.
 
 0.999
SFK31718.1
L-proline dehydrogenase.
    
 0.946
SFK54951.1
Glutamate synthase (NADH) large subunit.
    
 0.939
SFK79635.1
Phosphoribosylformylglycinamidine synthase subunit I.
  
 
 0.908
SFJ99965.1
Nicotinate-nucleotide adenylyltransferase.
  
  
 0.890
SFK54386.1
Leucine dehydrogenase.
     
 0.887
SFK54927.1
Glutamate synthase (NADH) small subunit.
    
 0.882
SFK00018.1
GTP-binding protein.
 
  
 0.879
SFK24275.1
Pyrroline-5-carboxylate reductase.
 
 
 0.866
SFK43732.1
Pyrroline-5-carboxylate reductase.
 
 
 0.859
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.