STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK12523.1Cytochrome c oxidase assembly protein subunit 11. (207 aa)    
Predicted Functional Partners:
SFK12558.1
Protoheme IX farnesyltransferase.
 
 0.999
SFK71050.1
Cytochrome c oxidase assembly protein subunit 15.
 
 0.995
SFK12505.1
Cytochrome c oxidase subunit 3.
 
 
 0.993
SFK12591.1
Cytochrome c oxidase subunit 2.
 
 
 0.990
SFK12468.1
Surfeit locus 1 family protein.
 
 
 0.979
SFK12576.1
Cytochrome c oxidase subunit 1.
 
 
 0.954
SFK44738.1
Cytochrome bo3 quinol oxidase subunit 2.
  
 
 0.916
SFJ96698.1
Cytochrome c.
  
  
 0.894
SFK10670.1
Protein SCO1/2.
 
 
 0.879
SFK14274.1
Cytochrome c.
  
  
 0.875
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.