STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK14668.1GMP synthase-Glutamine amidotransferase. (232 aa)    
Predicted Functional Partners:
SFK64475.1
IMP dehydrogenase.
  
 
 0.974
SFK24614.1
Adenine phosphoribosyltransferase.
  
 
 0.827
SFK80555.1
Xanthine phosphoribosyltransferase.
  
 
 0.820
SFK53556.1
GMP synthase (glutamine-hydrolysing).
  
  
 
0.817
SFJ91406.1
Hypoxanthine phosphoribosyltransferase.
    
 0.810
SFK85598.1
5'-nucleotidase /3'-nucleotidase.
    
 0.804
SFK63798.1
Guanylate kinase.
  
 
 0.801
SFK64278.1
GMP synthase (glutamine-hydrolysing).
    
 0.785
SFL10649.1
LSU ribosomal protein L11P.
   
    0.782
SFJ94037.1
XTP/dITP diphosphohydrolase.
  
 
  0.763
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.