STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK15691.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (406 aa)    
Predicted Functional Partners:
SFK15760.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.995
SFK15743.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.964
SFK42312.1
Multiple sugar transport system permease protein.
  
  0.856
SFK15653.1
Predicted dehydrogenase.
 
     0.855
SFK42329.1
Multiple sugar transport system permease protein.
 
  0.852
SFL01963.1
Multiple sugar transport system permease protein.
  
  0.827
SFL14420.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
  0.799
SFL01982.1
Multiple sugar transport system permease protein.
  
  0.790
SFK15674.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family.
  
  0.780
SFK81358.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
  0.758
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.