STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK21467.1Cell division protein FtsA. (440 aa)    
Predicted Functional Partners:
SFK21453.1
Cell division protein FtsZ.
 0.999
SFK21479.1
Cell division protein FtsQ.
 
 0.999
SFK21560.1
Cell division protein FtsW.
 
 0.990
SFK21499.1
D-alanine-D-alanine ligase.
  
  
 0.986
SFK21626.1
Cell division protein FtsI (penicillin-binding protein 3).
 
 0.983
SFK21532.1
UDP-N-acetylmuramate--L-alanine ligase.
 
  
 0.976
SFK21548.1
UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase.
 
  
 0.953
SFK21578.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
  
 0.953
SFK21608.1
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
 
  
 0.943
SFK21598.1
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
  
 0.895
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.