STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK21763.1Threonine/homoserine/homoserine lactone efflux protein. (206 aa)    
Predicted Functional Partners:
SFK12645.1
LysE type translocator.
  
    0.778
SFK71947.1
Threonine/homoserine/homoserine lactone efflux protein.
  
    0.778
SFJ95164.1
Threonine/homoserine/homoserine lactone efflux protein.
  
    0.777
SFK32866.1
Threonine/homoserine/homoserine lactone efflux protein.
  
    0.777
SFK12657.1
LysE type translocator.
  
     0.775
SFJ95123.1
Threonine/homoserine/homoserine lactone efflux protein.
  
     0.773
SFJ95143.1
Threonine/homoserine/homoserine lactone efflux protein.
  
     0.772
SFK21782.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
       0.634
SFK21748.1
Tripeptide aminopeptidase.
       0.539
SFK21789.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
       0.438
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.