STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK36183.1Carbon-monoxide dehydrogenase medium subunit. (266 aa)    
Predicted Functional Partners:
SFK36225.1
Carbon-monoxide dehydrogenase large subunit.
 
 0.999
SFK36243.1
Carbon-monoxide dehydrogenase small subunit.
 0.999
SFK77318.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.997
SFK53622.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 0.988
SFL01704.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 0.988
SFK53602.1
Isoquinoline 1-oxidoreductase, beta subunit.
  
 0.980
SFL01723.1
Isoquinoline 1-oxidoreductase, beta subunit.
  
 0.980
SFJ98612.1
Xanthine dehydrogenase accessory factor.
 
 
 0.965
SFJ98594.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.943
SFK36262.1
Hypothetical protein.
 
 
 0.929
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.