STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK37930.1Sulfoacetaldehyde acetyltransferase. (592 aa)    
Predicted Functional Partners:
SFK20275.1
Acetolactate synthase, small subunit.
 
 0.994
SFK20468.1
Ketol-acid reductoisomerase.
 
 
 0.910
SFK37904.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
  
 
 0.779
SFK35030.1
Acetate kinase.
    
 0.763
SFK52705.1
3-isopropylmalate dehydrogenase.
 0.758
SFK70185.1
Threonine dehydratase.
  
 0.728
SFJ93138.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.721
SFK11578.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.721
SFJ96987.1
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit.
  
 
 0.712
SFK46444.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.694
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.