STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK54727.1Chemotaxis protein MotB. (286 aa)    
Predicted Functional Partners:
SFK54749.1
Chemotaxis protein MotA.
 
 0.999
SFK66113.1
Chemotaxis protein MotA.
  
 0.995
SFK78355.1
Flagellar hook-associated protein 1 FlgK.
 
  
 0.965
SFK57792.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
  
 0.953
SFK25333.1
Flagellar motor switch protein FliG.
 
 
 0.945
SFK78397.1
Flagellar protein FlaF.
 
    0.944
SFK78330.1
Flagellar hook protein FlgE.
 
  
 0.933
SFK57821.1
Purine-binding chemotaxis protein CheW.
 
  
 0.930
SFK25351.1
Flagellar M-ring protein FliF.
 
  
 0.925
SFK78855.1
Flagellar basal-body rod protein FlgC.
 
  
 0.920
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.