STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK65470.1Flagellar biosynthesis protein FlhA. (693 aa)    
Predicted Functional Partners:
SFK78989.1
Flagellar biosynthetic protein FlhB.
 0.994
SFK66014.1
Flagellar biosynthetic protein FlhB.
 0.992
SFK65489.1
Flagellar biosynthetic protein FliQ.
 
 
 0.991
SFK65815.1
Flagellar biosynthetic protein FliP.
 
 
 0.989
SFK78788.1
Flagellar biosynthetic protein FliP.
 
 
 0.989
SFK66173.1
Flagellum-specific ATP synthase.
 
 0.988
SFL15334.1
Type III secretion system ATPase, FliI/YscN.
 
 0.988
SFK58025.1
Flagellum-specific ATP synthase.
 
 0.987
SFK78968.1
Flagellar biosynthetic protein FliR.
 
 
 0.985
SFK65450.1
Flagellar biosynthetic protein FliR.
 
 
 0.984
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.