STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK74206.1Anthranilate phosphoribosyltransferase. (345 aa)    
Predicted Functional Partners:
SFJ93078.1
Phosphoribosylanthranilate isomerase.
 
 0.999
SFK37904.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
 0.999
SFK74180.1
Indole-3-glycerol phosphate synthase.
 
 0.999
SFK91734.1
Anthranilate synthase, component I /anthranilate synthase, component II.
 0.999
SFK35706.1
Phosphoribosylanthranilate isomerase.
 
 
 0.997
SFJ93384.1
Tryptophan synthase, alpha chain.
  
 0.991
SFJ93056.1
Tryptophan synthase beta chain.
 
 0.988
SFK65206.1
Tryptophan synthase beta chain.
 
 0.988
SFK10889.1
Chorismate synthase.
  
 
 0.894
SFK74153.1
Cyclic pyranopterin monophosphate synthase subunit MoaC.
     
 0.798
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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