STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK70371.1Diaminohydroxyphosphoribosylaminopyrimidine deaminase. (381 aa)    
Predicted Functional Partners:
SFK10869.1
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II.
 0.999
SFK70393.1
Riboflavin synthase alpha chain.
 
 0.999
SFL22740.1
GTP cyclohydrolase II.
 0.999
SFK70413.1
6,7-dimethyl-8-ribityllumazine synthase.
 
 0.997
SFK35746.1
Protein of unknown function.
  
 0.978
SFK72341.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
   
   0.953
SFK70443.1
Thiamine-phosphate kinase.
    
 0.946
SFK70357.1
Transcriptional repressor NrdR.
 
  
 0.901
SFK72359.1
acetyl-CoA carboxylase biotin carboxyl carrier protein.
   
   0.857
SFK70429.1
NusB antitermination factor.
  
  
 0.854
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.