STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK90894.1Phage conserved hypothetical protein, phiE125 gp8 family. (190 aa)    
Predicted Functional Partners:
SFK90820.1
Phage portal protein, HK97 family.
 
   0.997
SFK90949.1
Phage major tail protein, TP901-1 family.
 
   0.997
SFK90874.1
Phage major capsid protein, HK97 family.
 
 
 0.996
SFK90995.1
TIGR02217 family protein.
 
 
 
 0.991
SFK91011.1
Phage conserved hypothetical protein BR0599.
 
 
 
 0.991
SFK91044.1
Putative phage tail protein.
 
 
   0.991
SFK90912.1
Phage head-tail adaptor, putative, SPP1 family.
  
 
 0.985
SFK90929.1
Protein of unknown function.
   
   0.968
SFK90961.1
Phage tail tube protein, GTA-gp10.
 
    0.951
SFK90855.1
Hypothetical protein.
 
   
 0.922
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.