STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK95627.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
SFK57792.1
Two-component system, chemotaxis family, sensor kinase CheA.
    
 0.734
SFK25964.1
Two-component system, sensor histidine kinase RpfC.
   
 0.684
SFK81689.1
Hpt sensor hybrid histidine kinase.
   
 0.684
SFK08988.1
Na+/proline symporter.
    
 0.672
SFJ94163.1
PAS domain S-box-containing protein.
    
 0.660
SFK79010.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
    
 0.660
SFK10869.1
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II.
  
 
 0.654
SFK55373.1
TPR repeat-containing protein.
   
 
 0.638
SFK55988.1
TPR repeat-containing protein.
   
 
 0.638
SFK80293.1
Tetratricopeptide repeat-containing protein.
   
 
 0.638
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.