Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ93384.1 | SFL06042.1 | SAMN04488518_101334 | SAMN04488518_115111 | Tryptophan synthase, alpha chain. | Predicted lactoylglutathione lyase. | 0.414 |
SFK46726.1 | SFL06042.1 | SAMN04488518_105236 | SAMN04488518_115111 | Glutathione S-transferase. | Predicted lactoylglutathione lyase. | 0.454 |
SFL06001.1 | SFL06025.1 | SAMN04488518_115109 | SAMN04488518_115110 | Two component transcriptional regulator, LuxR family. | Two-component system, LuxR family, sensor histidine kinase TtrS. | 0.994 |
SFL06001.1 | SFL06042.1 | SAMN04488518_115109 | SAMN04488518_115111 | Two component transcriptional regulator, LuxR family. | Predicted lactoylglutathione lyase. | 0.475 |
SFL06025.1 | SFL06001.1 | SAMN04488518_115110 | SAMN04488518_115109 | Two-component system, LuxR family, sensor histidine kinase TtrS. | Two component transcriptional regulator, LuxR family. | 0.994 |
SFL06025.1 | SFL06042.1 | SAMN04488518_115110 | SAMN04488518_115111 | Two-component system, LuxR family, sensor histidine kinase TtrS. | Predicted lactoylglutathione lyase. | 0.480 |
SFL06042.1 | SFJ93384.1 | SAMN04488518_115111 | SAMN04488518_101334 | Predicted lactoylglutathione lyase. | Tryptophan synthase, alpha chain. | 0.414 |
SFL06042.1 | SFK46726.1 | SAMN04488518_115111 | SAMN04488518_105236 | Predicted lactoylglutathione lyase. | Glutathione S-transferase. | 0.454 |
SFL06042.1 | SFL06001.1 | SAMN04488518_115111 | SAMN04488518_115109 | Predicted lactoylglutathione lyase. | Two component transcriptional regulator, LuxR family. | 0.475 |
SFL06042.1 | SFL06025.1 | SAMN04488518_115111 | SAMN04488518_115110 | Predicted lactoylglutathione lyase. | Two-component system, LuxR family, sensor histidine kinase TtrS. | 0.480 |
SFL06042.1 | SFL06064.1 | SAMN04488518_115111 | SAMN04488518_115112 | Predicted lactoylglutathione lyase. | Putative metallopeptidase. | 0.522 |
SFL06064.1 | SFL06042.1 | SAMN04488518_115112 | SAMN04488518_115111 | Putative metallopeptidase. | Predicted lactoylglutathione lyase. | 0.522 |