STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL22799.1NAD(P)H-dependent FMN reductase. (200 aa)    
Predicted Functional Partners:
SFL22815.1
WD40 repeat.
       0.778
SFL22777.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
     
 0.574
SFK62839.1
F420-dependent oxidoreductase, CPS_4043 family.
  
 0.548
SFK95892.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
 0.548
SFL22759.1
WD40 repeat.
       0.542
SFL22740.1
GTP cyclohydrolase II.
     
 0.522
SFL13147.1
Reductive dehalogenase.
    
  0.490
SFK86114.1
Predicted dithiol-disulfide isomerase, DsbA family.
  
    0.462
SFK57515.1
Putative hydroxymethylpyrimidine transport system substrate-binding protein.
  
 
  0.452
SFK91709.1
NitT/TauT family transport system substrate-binding protein.
  
 
  0.452
Your Current Organism:
Pseudovibrio ascidiaceicola
NCBI taxonomy Id: 285279
Other names: DSM 16392, IAM 15084, JCM 21545, KCTC 12308, NBRC 100514, P. ascidiaceicola, Pseudovibrio ascidiaceicola Fukunaga et al. 2006, Pseudovibrio sp. F423, strain F423
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