STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE64806.1Golgi phosphoprotein 3 (GPP34). (224 aa)    
Predicted Functional Partners:
SFF24713.1
PAS domain S-box-containing protein.
  
 0.999
SFF02637.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.932
SFE64828.1
Predicted nuclease (RNAse H fold).
       0.773
SFE99442.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.757
SFE73933.1
PAS fold-containing protein.
  
 0.733
SFF19244.1
Flagellar motor switch protein FliG.
  
   0.710
SFE89170.1
HAMP domain-containing protein.
  
    0.697
SFF19082.1
Flagellar hook protein FlgE.
   
    0.687
SFF19329.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.677
SFF18934.1
Flagellar motor switch protein FliN/FliY.
  
   0.665
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.