STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE70953.1Acetoin utilization protein AcuC. (390 aa)    
Predicted Functional Partners:
SFF10989.1
Hypothetical protein.
    
 0.954
SFE80631.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
   
 0.907
cobB
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
    
 
 0.868
SFF07053.1
Acyl-CoA synthetase (NDP forming).
 
     0.790
SFE81209.1
Conserved hypothetical protein.
    
  0.784
SFE90592.1
Uridine kinase.
   
  0.734
SFF01610.1
Uridine kinase.
   
  0.734
SFE70893.1
Trk system potassium uptake protein TrkA.
       0.685
SFE74615.1
SWIM zinc finger.
    
 0.660
SFE79921.1
Helicase conserved C-terminal domain-containing protein.
    
 0.660
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.