STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE78224.1Signal transduction histidine kinase. (443 aa)    
Predicted Functional Partners:
SFE78197.1
Two component transcriptional regulator, LuxR family.
 0.971
SFF28295.1
Two component transcriptional regulator, LuxR family.
 
 0.876
SFF17143.1
Two component transcriptional regulator, LuxR family.
 
 0.874
SFF33639.1
Two component transcriptional regulator, LuxR family.
 
 0.873
SFE82863.1
Two component transcriptional regulator, LuxR family.
 
 0.869
SFF20296.1
Two component transcriptional regulator, LuxR family.
  
 0.861
SFE84839.1
Two component transcriptional regulator, LuxR family.
  
 0.855
SFF11625.1
Two component transcriptional regulator, LuxR family.
 
 0.853
SFE78142.1
ABC-2 type transport system permease protein.
 
     0.850
SFE78055.1
Two component transcriptional regulator, LuxR family.
  
 0.828
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.