STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE86494.1Carboxypeptidase regulatory-like domain-containing protein. (475 aa)    
Predicted Functional Partners:
SFE72453.1
NADH dehydrogenase subunit M.
    
 
 0.881
SFE90104.1
SseB protein N-terminal domain-containing protein.
  
 0.775
SFF04097.1
Peptidase inhibitor I9.
  
 0.775
SFF19776.1
Uncharacterized membrane protein YgcG, contains a TPM-fold domain.
  
 0.775
SFF10989.1
Hypothetical protein.
  
 
  0.771
SFF18520.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.660
SFE67026.1
Hypothetical protein.
    
 0.590
SFF06988.1
Protein of unknown function.
    
 0.590
SFF16981.1
Hypothetical protein.
    
 0.590
SFF24004.1
Protein of unknown function.
    
 0.590
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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