STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF00698.1Glyoxylase, beta-lactamase superfamily II. (228 aa)    
Predicted Functional Partners:
SFF04321.1
Glyoxylase, beta-lactamase superfamily II.
  
  
  0.903
SFF01730.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.882
SFE73355.1
Adenylyltransferase and sulfurtransferase.
  
 0.839
SFF00718.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
       0.805
SFF00679.1
Hypothetical protein.
       0.747
SFF00660.1
Solute carrier family 10 (sodium/bile acid cotransporter), member 7.
  
    0.699
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.595
SFF21539.1
FAD/FMN-containing dehydrogenase.
    
 0.581
SFE80204.1
FAD/FMN-containing dehydrogenase.
     
 0.576
SFF24676.1
Protein of unknown function.
  
     0.555
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.