STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF03836.1Prepilin-type N-terminal cleavage/methylation domain-containing protein. (124 aa)    
Predicted Functional Partners:
SFF03860.1
Type IV pilus assembly protein PilC.
 
  
 0.974
SFF03902.1
Type IV pilus assembly protein PilB.
 
 0.934
SFF03878.1
Twitching motility protein PilT.
 
   
 0.900
SFF03690.1
Type IV pilus assembly protein PilM.
 
  
 0.818
SFF03714.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.759
SFF03813.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
    
0.525
SFF09742.1
Competence protein.
   
  
 0.512
SFF09885.1
Competence protein.
   
  
 0.512
SFF29785.1
Twitching motility protein PilT.
 
   
 0.511
SFF03923.1
Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family.
       0.423
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.