STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF05963.1Amino acid ABC transporter membrane protein, PAAT family. (222 aa)    
Predicted Functional Partners:
SFF05987.1
Cystine transport system ATP-binding protein.
  0.999
SFF05936.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
  0.998
SFE85869.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.996
SFE88788.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  0.996
SFE85915.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  0.995
SFE88767.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
  0.942
SFF01311.1
Putative ABC transport system ATP-binding protein.
 
   
  0.858
SFF12502.1
Putative ABC transport system ATP-binding protein.
 
   
  0.793
SFF22060.1
Putative ABC transport system ATP-binding protein.
 
   
  0.790
SFF12327.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
  0.768
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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