STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF07155.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
SFF07134.1
DNA topoisomerase IV subunit B.
 
     0.716
SFE84186.1
Superfamily II DNA or RNA helicase.
  
     0.558
SFE89288.1
Protein of unknown function.
  
     0.550
SFF08830.1
Protein of unknown function.
  
     0.526
SFF06857.1
Protein of unknown function.
  
     0.525
SFF06389.1
Protein of unknown function.
  
     0.513
SFF07177.1
Enoyl-CoA hydratase.
       0.498
SFF09592.1
Protein of unknown function.
  
     0.495
SFF06921.1
Protein of unknown function.
  
     0.494
SFE87834.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.