Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE87739.1 | SFF08084.1 | SAMN04488035_0884 | SAMN04488035_1486 | DivIVA domain-containing protein. | Protein of unknown function. | 0.649 |
SFE99529.1 | SFF07867.1 | SAMN04488035_1089 | SAMN04488035_1473 | Hypothetical protein. | Protein of unknown function. | 0.409 |
SFE99529.1 | SFF08084.1 | SAMN04488035_1089 | SAMN04488035_1486 | Hypothetical protein. | Protein of unknown function. | 0.710 |
SFF02677.1 | SFF04340.1 | SAMN04488035_1234 | SAMN04488035_1308 | MerR HTH family regulatory protein. | Protein of unknown function. | 0.684 |
SFF02677.1 | SFF06857.1 | SAMN04488035_1234 | SAMN04488035_1426 | MerR HTH family regulatory protein. | Protein of unknown function. | 0.577 |
SFF02677.1 | SFF06921.1 | SAMN04488035_1234 | SAMN04488035_1429 | MerR HTH family regulatory protein. | Protein of unknown function. | 0.771 |
SFF02677.1 | SFF07867.1 | SAMN04488035_1234 | SAMN04488035_1473 | MerR HTH family regulatory protein. | Protein of unknown function. | 0.659 |
SFF02677.1 | SFF08084.1 | SAMN04488035_1234 | SAMN04488035_1486 | MerR HTH family regulatory protein. | Protein of unknown function. | 0.761 |
SFF02677.1 | rbpA-2 | SAMN04488035_1234 | SAMN04488035_1230 | MerR HTH family regulatory protein. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.743 |
SFF04340.1 | SFF02677.1 | SAMN04488035_1308 | SAMN04488035_1234 | Protein of unknown function. | MerR HTH family regulatory protein. | 0.684 |
SFF04340.1 | SFF06857.1 | SAMN04488035_1308 | SAMN04488035_1426 | Protein of unknown function. | Protein of unknown function. | 0.714 |
SFF04340.1 | SFF06921.1 | SAMN04488035_1308 | SAMN04488035_1429 | Protein of unknown function. | Protein of unknown function. | 0.735 |
SFF04340.1 | SFF07867.1 | SAMN04488035_1308 | SAMN04488035_1473 | Protein of unknown function. | Protein of unknown function. | 0.621 |
SFF04340.1 | SFF08084.1 | SAMN04488035_1308 | SAMN04488035_1486 | Protein of unknown function. | Protein of unknown function. | 0.665 |
SFF04340.1 | rbpA-2 | SAMN04488035_1308 | SAMN04488035_1230 | Protein of unknown function. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.705 |
SFF06857.1 | SFF02677.1 | SAMN04488035_1426 | SAMN04488035_1234 | Protein of unknown function. | MerR HTH family regulatory protein. | 0.577 |
SFF06857.1 | SFF04340.1 | SAMN04488035_1426 | SAMN04488035_1308 | Protein of unknown function. | Protein of unknown function. | 0.714 |
SFF06857.1 | SFF06921.1 | SAMN04488035_1426 | SAMN04488035_1429 | Protein of unknown function. | Protein of unknown function. | 0.774 |
SFF06857.1 | SFF07867.1 | SAMN04488035_1426 | SAMN04488035_1473 | Protein of unknown function. | Protein of unknown function. | 0.720 |
SFF06857.1 | SFF08084.1 | SAMN04488035_1426 | SAMN04488035_1486 | Protein of unknown function. | Protein of unknown function. | 0.687 |
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