STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF16856.1ATP-binding cassette, subfamily B. (577 aa)    
Predicted Functional Partners:
SFE88788.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.900
SFF33759.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.899
SFF20440.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
     
0.887
SFF18494.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.865
SFF16842.1
ATP-binding cassette, subfamily B.
 
    
0.822
SFF12327.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.681
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.677
SFF18520.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
 
0.560
SFF16882.1
Hypothetical protein.
  
    0.536
SFF16869.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
    0.529
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.