Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE79018.1 | SFE79042.1 | SAMN04488035_0530 | SAMN04488035_0531 | Predicted extracellular nuclease. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 0.950 |
SFE79018.1 | SFF20114.1 | SAMN04488035_0530 | SAMN04488035_1941 | Predicted extracellular nuclease. | CubicO group peptidase, beta-lactamase class C family. | 0.873 |
SFE79018.1 | guaA | SAMN04488035_0530 | SAMN04488035_0490 | Predicted extracellular nuclease. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.938 |
SFE79042.1 | SFE79018.1 | SAMN04488035_0531 | SAMN04488035_0530 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | Predicted extracellular nuclease. | 0.950 |
SFE79042.1 | SFF20114.1 | SAMN04488035_0531 | SAMN04488035_1941 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | CubicO group peptidase, beta-lactamase class C family. | 0.573 |
SFE79042.1 | guaA | SAMN04488035_0531 | SAMN04488035_0490 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.910 |
SFF10711.1 | SFF20114.1 | SAMN04488035_1630 | SAMN04488035_1941 | Beta-glucosidase. | CubicO group peptidase, beta-lactamase class C family. | 0.492 |
SFF20099.1 | SFF20114.1 | SAMN04488035_1940 | SAMN04488035_1941 | Hypothetical protein. | CubicO group peptidase, beta-lactamase class C family. | 0.773 |
SFF20099.1 | SFF20133.1 | SAMN04488035_1940 | SAMN04488035_1942 | Hypothetical protein. | Phytoene dehydrogenase-related protein. | 0.773 |
SFF20099.1 | SFF20148.1 | SAMN04488035_1940 | SAMN04488035_1943 | Hypothetical protein. | LytR cell envelope-related transcriptional attenuator. | 0.561 |
SFF20099.1 | SFF20166.1 | SAMN04488035_1940 | SAMN04488035_1944 | Hypothetical protein. | Protein of unknown function. | 0.428 |
SFF20114.1 | SFE79018.1 | SAMN04488035_1941 | SAMN04488035_0530 | CubicO group peptidase, beta-lactamase class C family. | Predicted extracellular nuclease. | 0.873 |
SFF20114.1 | SFE79042.1 | SAMN04488035_1941 | SAMN04488035_0531 | CubicO group peptidase, beta-lactamase class C family. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family. | 0.573 |
SFF20114.1 | SFF10711.1 | SAMN04488035_1941 | SAMN04488035_1630 | CubicO group peptidase, beta-lactamase class C family. | Beta-glucosidase. | 0.492 |
SFF20114.1 | SFF20099.1 | SAMN04488035_1941 | SAMN04488035_1940 | CubicO group peptidase, beta-lactamase class C family. | Hypothetical protein. | 0.773 |
SFF20114.1 | SFF20133.1 | SAMN04488035_1941 | SAMN04488035_1942 | CubicO group peptidase, beta-lactamase class C family. | Phytoene dehydrogenase-related protein. | 0.811 |
SFF20114.1 | SFF20148.1 | SAMN04488035_1941 | SAMN04488035_1943 | CubicO group peptidase, beta-lactamase class C family. | LytR cell envelope-related transcriptional attenuator. | 0.561 |
SFF20114.1 | SFF20166.1 | SAMN04488035_1941 | SAMN04488035_1944 | CubicO group peptidase, beta-lactamase class C family. | Protein of unknown function. | 0.428 |
SFF20114.1 | guaA | SAMN04488035_1941 | SAMN04488035_0490 | CubicO group peptidase, beta-lactamase class C family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.681 |
SFF20133.1 | SFF20099.1 | SAMN04488035_1942 | SAMN04488035_1940 | Phytoene dehydrogenase-related protein. | Hypothetical protein. | 0.773 |
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