STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF22131.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. (236 aa)    
Predicted Functional Partners:
SFF22150.1
Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily.
 
     0.812
SFE98293.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.794
SFF24233.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.794
SFE79630.1
UDP-glucose 4-epimerase.
  
     0.725
SFF22109.1
PAP2 superfamily protein.
       0.661
SFE78887.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.624
SFE65692.1
Hypothetical protein.
  
     0.611
SFF22167.1
Hypothetical protein.
       0.566
SFF20084.1
Hypothetical protein.
 
     0.529
SFF02365.1
Protein of unknown function.
  
     0.509
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.