STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF22480.1Protein of unknown function. (96 aa)    
Predicted Functional Partners:
SFF22443.1
Helicase/secretion neighborhood TadE-like protein.
 
   
 0.867
SFF22460.1
Hypothetical protein.
       0.833
SFE87739.1
DivIVA domain-containing protein.
  
     0.598
SFF22500.1
Fucose permease.
       0.526
SFE79415.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.486
SFF30639.1
Hypothetical protein.
  
     0.486
SFE83655.1
Hypothetical protein.
  
   
 0.449
SFF22569.1
Type II secretion system (T2SS), protein F.
     
 0.447
SFF22583.1
Tight adherence protein B.
     
 0.447
SFE89730.1
DivIVA domain-containing protein.
  
     0.440
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.