STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF28870.1Protein of unknown function; Manually curated. (125 aa)    
Predicted Functional Partners:
SFF28886.1
Hypothetical protein.
       0.773
SFF28854.1
Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain.
 
     0.743
SFF08830.1
Protein of unknown function.
  
     0.734
SFF28907.1
Phosphomannomutase.
       0.730
SFF28923.1
Hypothetical protein.
       0.701
SFE70339.1
Hypothetical protein.
   
    0.671
SFF09592.1
Protein of unknown function.
  
     0.621
SFF28937.1
Cation diffusion facilitator family transporter.
       0.610
SFE72106.1
Geranylgeranyl reductase family.
  
     0.585
SFF08449.1
Hypothetical protein.
  
     0.584
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.