STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF32464.1Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Belongs to the SEDS family. (497 aa)    
Predicted Functional Partners:
SFF32473.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
 
 0.999
SFE89429.1
Cell division protein FtsI (penicillin-binding protein 3).
 
 0.971
SFF32452.1
Protein phosphatase.
  
 0.965
SFF32433.1
FHA domain-containing protein.
 
   
 0.929
SFF32500.1
Serine/threonine protein kinase.
 
 
 0.927
SFF32441.1
FHA domain-containing protein.
 
   
 0.926
SFF32485.1
Serine/threonine protein kinase.
 
 
 0.918
SFE89617.1
Cell division protein FtsQ.
  
 
 0.861
murG
UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 0.835
SFF08904.1
Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.821
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.