STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF35423.1Fic family protein. (408 aa)    
Predicted Functional Partners:
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
   0.791
SFE74241.1
Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family.
    
   0.791
SFF35436.1
Cold shock protein, CspA family.
       0.610
SFF35412.1
Hypothetical protein.
       0.586
SFF35397.1
Imidazolonepropionase.
       0.495
SFE78112.1
Hypothetical protein.
  
     0.479
SFE85363.1
Hypothetical protein.
  
     0.440
SFF35449.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
       0.434
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.