STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF35746.1ABC-2 type transport system permease protein. (237 aa)    
Predicted Functional Partners:
SFF35771.1
ABC-2 type transport system ATP-binding protein.
 
 0.981
SFF08185.1
ABC-2 type transport system ATP-binding protein.
 
 0.743
SFF35726.1
Uncharacterized protein YjbI, contains pentapeptide repeats.
 
     0.737
SFF08166.1
ABC-2 type transport system permease protein.
  
  
 0.703
SFE77144.1
3-hydroxypropanoate dehydrogenase.
  
    0.591
SFF21940.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.577
SFE87906.1
ABC-2 type transport system ATP-binding protein.
 
 0.546
SFF35791.1
Membrane protein YdbS, contains bPH2 (pleckstrin homology) domain.
       0.544
SFF28740.1
ABC-2 type transport system permease protein.
 
  
  0.536
SFF28750.1
ABC-2 type transport system ATP-binding protein.
 
 0.531
Your Current Organism:
Sanguibacter marinus
NCBI taxonomy Id: 285351
Other names: CGMCC 1.3457, DSM 19083, JCM 12547, S. marinus, Sanguibacter marinus Huang et al. 2005 emend. Pikuta et al. 2017, Sanguibacter sp. 1-19, strain 1-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.