STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEJ62786.1Spore photoproduct lyase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)    
Predicted Functional Partners:
OEJ57212.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.730
OEJ57010.1
Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
OEJ57569.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.488
OEJ61734.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.438
BGM19_39310
Endonuclease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.438
OEJ57213.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.424
OEJ57215.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.423
OEJ61376.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.422
OEJ57214.1
DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
       0.419
Your Current Organism:
Streptomyces agglomeratus
NCBI taxonomy Id: 285458
Other names: S. agglomeratus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.