STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BGM19_113002-nitropropane dioxygenase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
OEJ60240.1
NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.943
OEJ60263.1
NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.943
OEJ57552.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.938
OEJ58419.1
Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.921
BGM19_35640
Cold-shock protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.921
OEJ62536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.921
OEJ61799.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.911
OEJ60842.1
Protein-tyrosine-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.898
OEJ58674.1
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.871
OEJ59873.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.871
Your Current Organism:
Streptomyces agglomeratus
NCBI taxonomy Id: 285458
Other names: S. agglomeratus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.