STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT57505.1Tetratricopeptide repeat protein. (459 aa)    
Predicted Functional Partners:
AOT58161.1
Hypothetical protein.
  
     0.770
AOT57504.1
IgA Peptidase M64.
       0.768
AOT57253.1
Hypothetical protein.
  
     0.759
AOT57366.1
Hypothetical protein.
  
     0.759
AOT57802.1
Hypothetical protein.
  
 
   0.753
AOT59400.1
Hypothetical protein.
  
     0.744
AOT59329.1
Hypothetical protein.
  
     0.740
AOT57751.1
Hypothetical protein.
  
     0.735
AOT58430.1
Hypothetical protein.
  
     0.731
AOT59614.1
Putative acetyltransferase.
  
    0.727
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.