Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOT58605.1 | AOT58606.1 | A4G23_01419 | A4G23_01420 | Hypothetical protein. | Prephenate dehydrogenase. | 0.721 |
AOT58605.1 | AOT58607.1 | A4G23_01419 | A4G23_01421 | Hypothetical protein. | Hypothetical protein. | 0.673 |
AOT58606.1 | AOT58605.1 | A4G23_01420 | A4G23_01419 | Prephenate dehydrogenase. | Hypothetical protein. | 0.721 |
AOT58606.1 | AOT58607.1 | A4G23_01420 | A4G23_01421 | Prephenate dehydrogenase. | Hypothetical protein. | 0.822 |
AOT58606.1 | AOT58609.1 | A4G23_01420 | A4G23_01423 | Prephenate dehydrogenase. | Hypothetical protein. | 0.540 |
AOT58606.1 | AOT59423.1 | A4G23_01420 | A4G23_02265 | Prephenate dehydrogenase. | Hypothetical protein. | 0.467 |
AOT58606.1 | AOT61716.1 | A4G23_01420 | A4G23_04605 | Prephenate dehydrogenase. | Hypothetical protein. | 0.479 |
AOT58606.1 | cofD | A4G23_01420 | A4G23_02039 | Prephenate dehydrogenase. | 2-phospho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.507 |
AOT58606.1 | entS_2 | A4G23_01420 | A4G23_01422 | Prephenate dehydrogenase. | Enterobactin exporter EntS. | 0.426 |
AOT58606.1 | fbiB | A4G23_01420 | A4G23_02040 | Prephenate dehydrogenase. | Coenzyme F420:L-glutamate ligase; Bifunctional enzyme that catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives, and the FMNH2- dependent reduction of dehydro-F420-0 to form F420-0. | 0.509 |
AOT58606.1 | map_1 | A4G23_01420 | A4G23_01424 | Prephenate dehydrogenase. | Methionine aminopeptidase 2; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.463 |
AOT58607.1 | AOT58605.1 | A4G23_01421 | A4G23_01419 | Hypothetical protein. | Hypothetical protein. | 0.673 |
AOT58607.1 | AOT58606.1 | A4G23_01421 | A4G23_01420 | Hypothetical protein. | Prephenate dehydrogenase. | 0.822 |
AOT58607.1 | AOT59423.1 | A4G23_01421 | A4G23_02265 | Hypothetical protein. | Hypothetical protein. | 0.444 |
AOT58607.1 | entS_2 | A4G23_01421 | A4G23_01422 | Hypothetical protein. | Enterobactin exporter EntS. | 0.521 |
AOT58609.1 | AOT58606.1 | A4G23_01423 | A4G23_01420 | Hypothetical protein. | Prephenate dehydrogenase. | 0.540 |
AOT58609.1 | map_1 | A4G23_01423 | A4G23_01424 | Hypothetical protein. | Methionine aminopeptidase 2; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.786 |
AOT59423.1 | AOT58606.1 | A4G23_02265 | A4G23_01420 | Hypothetical protein. | Prephenate dehydrogenase. | 0.467 |
AOT59423.1 | AOT58607.1 | A4G23_02265 | A4G23_01421 | Hypothetical protein. | Hypothetical protein. | 0.444 |
AOT61716.1 | AOT58606.1 | A4G23_04605 | A4G23_01420 | Hypothetical protein. | Prephenate dehydrogenase. | 0.479 |
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