Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOT58718.1 | AOT58802.1 | A4G23_01534 | A4G23_01621 | Hypothetical protein. | Hypothetical protein. | 0.600 |
AOT58718.1 | rgy | A4G23_01534 | A4G23_01951 | Hypothetical protein. | Reverse gyrase. | 0.600 |
AOT58798.1 | AOT58801.1 | A4G23_01617 | A4G23_01620 | Nitronate monooxygenase. | Metallo-beta-lactamase superfamily protein. | 0.622 |
AOT58798.1 | AOT58802.1 | A4G23_01617 | A4G23_01621 | Nitronate monooxygenase. | Hypothetical protein. | 0.620 |
AOT58798.1 | dnaJ_1 | A4G23_01617 | A4G23_01618 | Nitronate monooxygenase. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.716 |
AOT58798.1 | hinT | A4G23_01617 | A4G23_01615 | Nitronate monooxygenase. | HIT-like protein HinT. | 0.709 |
AOT58798.1 | hrcA | A4G23_01617 | A4G23_01619 | Nitronate monooxygenase. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.708 |
AOT58798.1 | rnz_1 | A4G23_01617 | A4G23_01614 | Nitronate monooxygenase. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.709 |
AOT58798.1 | rsmE | A4G23_01617 | A4G23_01616 | Nitronate monooxygenase. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.883 |
AOT58801.1 | AOT58798.1 | A4G23_01620 | A4G23_01617 | Metallo-beta-lactamase superfamily protein. | Nitronate monooxygenase. | 0.622 |
AOT58801.1 | AOT58802.1 | A4G23_01620 | A4G23_01621 | Metallo-beta-lactamase superfamily protein. | Hypothetical protein. | 0.873 |
AOT58801.1 | dnaJ_1 | A4G23_01620 | A4G23_01618 | Metallo-beta-lactamase superfamily protein. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.676 |
AOT58801.1 | hinT | A4G23_01620 | A4G23_01615 | Metallo-beta-lactamase superfamily protein. | HIT-like protein HinT. | 0.611 |
AOT58801.1 | hrcA | A4G23_01620 | A4G23_01619 | Metallo-beta-lactamase superfamily protein. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.716 |
AOT58801.1 | rnz_1 | A4G23_01620 | A4G23_01614 | Metallo-beta-lactamase superfamily protein. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.608 |
AOT58801.1 | rsmE | A4G23_01620 | A4G23_01616 | Metallo-beta-lactamase superfamily protein. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.621 |
AOT58802.1 | AOT58718.1 | A4G23_01621 | A4G23_01534 | Hypothetical protein. | Hypothetical protein. | 0.600 |
AOT58802.1 | AOT58798.1 | A4G23_01621 | A4G23_01617 | Hypothetical protein. | Nitronate monooxygenase. | 0.620 |
AOT58802.1 | AOT58801.1 | A4G23_01621 | A4G23_01620 | Hypothetical protein. | Metallo-beta-lactamase superfamily protein. | 0.873 |
AOT58802.1 | AOT60088.1 | A4G23_01621 | A4G23_02952 | Hypothetical protein. | Hypothetical protein. | 0.632 |
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