STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycFTranscriptional regulatory protein YycF. (278 aa)    
Predicted Functional Partners:
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
 
 0.970
ccpA_2
Catabolite control protein A.
       0.809
mprB
Signal transduction histidine-protein kinase/phosphatase MprB.
 
 
 0.797
hndC
NADP-reducing hydrogenase subunit HndC.
   
 
 0.785
AOT59690.1
Hypothetical protein.
       0.773
degP
Periplasmic serine endoprotease DegP precursor.
 
  
 0.767
glnA
Glutamine synthetase.
      
 0.743
AOT59689.1
Alpha/beta hydrolase family protein.
       0.739
AOT59688.1
ThiS family protein.
 
     0.729
mprA_3
Response regulator MprA.
 
    
0.706
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.