STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT60489.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
AOT60487.1
Hypothetical protein.
 
     0.946
AOT59842.1
Hypothetical protein.
 
     0.775
AOT60488.1
Hypothetical protein.
       0.773
AOT61330.1
Hypothetical protein.
  
     0.750
AOT59727.1
Hypothetical protein.
  
     0.731
AOT57868.1
Hypothetical protein.
  
     0.700
AOT58103.1
Hypothetical protein.
  
     0.689
AOT59726.1
Hypothetical protein.
  
     0.679
AOT59850.1
Hypothetical protein.
  
     0.670
AOT61645.1
Hypothetical protein; Lantibiotic dehydratase, C terminus.
  
     0.664
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.