STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT60795.1Putative conjugal transfer protein. (448 aa)    
Predicted Functional Partners:
AOT60797.1
Bacterial type II secretion system protein F domain protein.
 
  
 0.979
AOT60796.1
Bacterial type II secretion system protein F domain protein.
 
  
 0.977
minD_2
Septum site-determining protein MinD.
 
  
 0.975
AOT60794.1
TadE-like protein.
  
  
 0.930
AOT60793.1
TadE-like protein.
  
  
 0.928
AOT60791.1
Hypothetical protein.
 
  
 0.921
AOT60803.1
Hypothetical protein.
 
     0.750
AOT60790.1
Hypothetical protein.
       0.688
AOT60165.1
Bacterial type II secretion system protein F domain protein.
  
  
 0.603
AOT60166.1
Bacterial type II secretion system protein F domain protein.
  
  
 0.603
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.