Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOT61326.1 | potB_2 | A4G23_04209 | A4G23_04192 | Hypothetical protein. | Spermidine/putrescine transport system permease protein PotB. | 0.540 |
AOT61326.1 | potD | A4G23_04209 | A4G23_04190 | Hypothetical protein. | Spermidine/putrescine-binding periplasmic protein precursor. | 0.540 |
AOT61326.1 | puuB_2 | A4G23_04209 | A4G23_04194 | Hypothetical protein. | Gamma-glutamylputrescine oxidoreductase. | 0.540 |
AOT61326.1 | ybiA | A4G23_04209 | A4G23_04189 | Hypothetical protein. | Swarming motility protein YbiA. | 0.540 |
AOT61326.1 | ydcV | A4G23_04209 | A4G23_04193 | Hypothetical protein. | Inner membrane ABC transporter permease protein YdcV. | 0.540 |
asnC_3 | potB_2 | A4G23_04181 | A4G23_04192 | Regulatory protein AsnC. | Spermidine/putrescine transport system permease protein PotB. | 0.506 |
asnC_3 | potD | A4G23_04181 | A4G23_04190 | Regulatory protein AsnC. | Spermidine/putrescine-binding periplasmic protein precursor. | 0.758 |
asnC_3 | puuB_2 | A4G23_04181 | A4G23_04194 | Regulatory protein AsnC. | Gamma-glutamylputrescine oxidoreductase. | 0.753 |
asnC_3 | ydcV | A4G23_04181 | A4G23_04193 | Regulatory protein AsnC. | Inner membrane ABC transporter permease protein YdcV. | 0.496 |
fbpC2 | potA_1 | A4G23_00429 | A4G23_04176 | Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. | 0.442 |
fbpC2 | potA_2 | A4G23_00429 | A4G23_04191 | Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.449 |
fbpC2 | potB_2 | A4G23_00429 | A4G23_04192 | Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily. | Spermidine/putrescine transport system permease protein PotB. | 0.942 |
fbpC2 | potD | A4G23_00429 | A4G23_04190 | Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily. | Spermidine/putrescine-binding periplasmic protein precursor. | 0.838 |
fbpC2 | ydcV | A4G23_00429 | A4G23_04193 | Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily. | Inner membrane ABC transporter permease protein YdcV. | 0.898 |
phnT | potB_2 | A4G23_03793 | A4G23_04192 | Putative 2-aminoethylphosphonate import ATP-binding protein PhnT; Belongs to the binding-protein-dependent transport system permease family. | Spermidine/putrescine transport system permease protein PotB. | 0.863 |
phnT | potD | A4G23_03793 | A4G23_04190 | Putative 2-aminoethylphosphonate import ATP-binding protein PhnT; Belongs to the binding-protein-dependent transport system permease family. | Spermidine/putrescine-binding periplasmic protein precursor. | 0.801 |
phnT | ydcV | A4G23_03793 | A4G23_04193 | Putative 2-aminoethylphosphonate import ATP-binding protein PhnT; Belongs to the binding-protein-dependent transport system permease family. | Inner membrane ABC transporter permease protein YdcV. | 0.812 |
potA_1 | fbpC2 | A4G23_04176 | A4G23_00429 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. | Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily. | 0.442 |
potA_1 | potA_2 | A4G23_04176 | A4G23_04191 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.450 |
potA_1 | potB_2 | A4G23_04176 | A4G23_04192 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. | Spermidine/putrescine transport system permease protein PotB. | 0.923 |
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