STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT61763.1Hypothetical protein. (479 aa)    
Predicted Functional Partners:
AOT61764.1
Peptidyl-tRNA hydrolase PTH2.
       0.708
AOT61765.1
Hypothetical protein.
 
     0.685
AOT59728.1
AAA-like domain protein.
   
    0.550
AOT61767.1
Hypothetical protein.
       0.540
ctpF
Putative cation-transporting ATPase F.
   
    0.537
yloB
Calcium-transporting ATPase.
   
    0.537
AOT62283.1
Calcium-transporting ATPase 1.
   
    0.537
pgdA_2
Peptidoglycan-N-acetylglucosamine deacetylase.
       0.536
AOT59626.1
DoxX.
  
  
 0.488
bprV_2
Extracellular basic protease precursor; Belongs to the peptidase S8 family.
  
    0.485
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.