STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716435_05442Unannotated protein. (223 aa)    
Predicted Functional Partners:
GCA_000716435_05441
Unannotated protein.
 
 0.966
GCA_000716435_06037
Unannotated protein.
   
 0.960
GCA_000716435_05387
Unannotated protein.
   
 0.918
GCA_000716435_08933
Unannotated protein.
 
  0.839
GCA_000716435_07535
Unannotated protein.
 
 0.833
GCA_000716435_00947
Unannotated protein.
  
  0.824
GCA_000716435_08468
Unannotated protein.
  
  0.823
GCA_000716435_03822
Unannotated protein.
  
  0.822
GCA_000716435_06012
Unannotated protein.
  
  0.811
GCA_000716435_05457
Unannotated protein.
  
  0.809
Your Current Organism:
Streptomyces xylophagus
NCBI taxonomy Id: 285514
Other names: S. xylophagus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.