STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716435_05880Unannotated protein. (178 aa)    
Predicted Functional Partners:
GCA_000716435_05879
Unannotated protein.
  
 
  0.861
GCA_000716435_06465
Unannotated protein.
  
 
 0.834
GCA_000716435_02409
Unannotated protein.
  
 
 0.822
GCA_000716435_00280
Unannotated protein.
 
  
  0.788
GCA_000716435_05877
Unannotated protein.
 
    0.749
GCA_000716435_06237
Unannotated protein.
  
 
 0.743
GCA_000716435_08540
Unannotated protein.
    
 0.695
GCA_000716435_05878
Unannotated protein.
  
    0.692
GCA_000716435_05875
Unannotated protein.
       0.685
GCA_000716435_05876
Unannotated protein.
       0.685
Your Current Organism:
Streptomyces xylophagus
NCBI taxonomy Id: 285514
Other names: S. xylophagus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.