STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716435_07252Unannotated protein. (157 aa)    
Predicted Functional Partners:
GCA_000716435_07251
Unannotated protein.
       0.857
GCA_000716435_07250
Unannotated protein.
    
  0.826
GCA_000716435_07249
Unannotated protein.
       0.723
GCA_000716435_05652
Unannotated protein.
   
  0.722
GCA_000716435_08058
Unannotated protein.
    
 0.722
GCA_000716435_07960
Unannotated protein.
    
  0.624
GCA_000716435_01986
Unannotated protein.
   
 
 0.622
GCA_000716435_04908
Unannotated protein.
   
 
 0.622
GCA_000716435_02500
Unannotated protein.
   
   0.611
GCA_000716435_07245
Unannotated protein.
       0.577
Your Current Organism:
Streptomyces xylophagus
NCBI taxonomy Id: 285514
Other names: S. xylophagus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.