STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCE70646.1PH domain-containing protein. (291 aa)    
Predicted Functional Partners:
SCE70658.1
Hypothetical protein.
       0.893
SCF31351.1
Putative sensory transduction regulator.
  
     0.721
SCF23092.1
Hypothetical protein.
  
     0.695
SCE72697.1
Hypothetical protein.
 
     0.690
SCF19930.1
Hypothetical protein.
 
     0.685
SCE70672.1
Hypothetical protein.
       0.678
SCF22452.1
RDD family protein.
  
    0.666
SCF23071.1
Hypothetical protein.
  
     0.664
SCF43688.1
Hypothetical protein.
 
     0.662
SCF23083.1
AAA-like domain-containing protein.
  
     0.661
Your Current Organism:
Micromonospora saelicesensis
NCBI taxonomy Id: 285676
Other names: DSM 44871, JCM 16032, LMG 24056, LMG:24056, M. saelicesensis, Micromonospora saelicesensis Trujillo et al. 2007, Micromonospora sp. Lupac 06, Micromonospora sp. Lupac 07, Micromonospora sp. Lupac 09, strain Lupac 09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.